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API Docs

The files in this directory are automatically generated from the docstrings in the source code. They include descriptions of each of the DataJoint tables and other classes/methods within Spyglass.

Directories

  • cli: See README.md at spyglass/examples/cli/README.md
  • common: Data insertion point for all pipelines.
  • data_import: Data insertion tools.
  • decoding: Decoding animal position from spiking data.
  • figurl_views: Tools for visualizing data.
  • lfp: Local field potential processing.
  • lock: Tables for locking files, preventing deletion.
  • position: Tracking animal posisiton via LEDs ('Trodes') or DeepLabCut.
  • linearization: Linearizing position data for decoding.
  • ripple: Detecting ripples in LFP data.
  • sharing: Tables for data sharing via Kachery.
  • spikesorting: Sorting spikes from raw electrophysiology data.
  • utils: Utilities for working with DataJoint and Neurodata Without Borders (NWB) data.